| Protein ZmOrphan297 | |
|---|---|
|
ZmOrphan297 is a protein in the Orphans family.
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| Information | |
| Orphans Name: | ZmOrphan297 |
| Species: | Maize |
| Orphans Family: | Orphans |
| Gene Name(Synonym): | |
| Uniprot ID: | K7VSF7 |
Protein ZmOrphan297
ZmOrphan297 is a protein in the Orphans family.
| Overview of domains present in v5 transcripts | ||
|---|---|---|
| PF00612 | PF02179 | |
| Zm00001eb342150_T001 |  | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d009385 | DAPseq |  |
sequence | fimo | position |
| Zm00001d009385 | DAPseq |  |
sequence | fimo | position |
| Zm00001d009385 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d009385 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmOrphan297 is the regulator
Interactions where ZmOrphan297 is the target
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Zm00001eb342150_T001 from maize genome v5
Amino Acid Sequence
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MLEAVKVDPSWSRVESSRSVSVPVRFVGSDPEPVRRAARMPPAAVLRKRAPSSEAAVIRLQAAARGFMARKSVRAVREVE
REAAEVGEKVAREAEALRGDARARIAVGEALMKMMLRLDVVRDAREYRKRVTKRVLALQDVVDALEPKSALYSEVVAEEN
ESEVTSEMADDGAEAAEMPVAAEHSGGIEVNAAAETVANMEVDGGKANSEAVPEAVKESENKQDDMHINDDQTEVSDEGK
WKMVADEAERTTEATRSTEALPQAPMTSEVTRMTWEAGAADSVLDTRKVMEMVEALCGQNTQHCAVIGALAERVGALDRA
VRLVENAERRRRRGKKLKKDGKGNNRCYTN
MLEAVKVDPSWSRVESSRSVSVPVRFVGSDPEPVRRAARMPPAAVLRKRAPSSEAAVIRLQAAARGFMARKSVRAVREVE
REAAEVGEKVAREAEALRGDARARIAVGEALMKMMLRLDVVRDAREYRKRVTKRVLALQDVVDALEPKSALYSEVVAEEN
ESEVTSEMADDGAEAAEMPVAAEHSGGIEVNAAAETVANMEVDGGKANSEAVPEAVKESENKQDDMHINDDQTEVSDEGK
WKMVADEAERTTEATRSTEALPQAPMTSEVTRMTWEAGAADSVLDTRKVMEMVEALCGQNTQHCAVIGALAERVGALDRA
VRLVENAERRRRRGKKLKKDGKGNNRCYTN
MLEAVKVDPSWSRVESSRSVSVPVRFVGSDPEPVRRAARMPPAAVLRKRAPSSEAAVIRLQAAARGFMARKSVRAVREVE
REAAEVGEKVAREAEALRGDARARIAVGEALMKMMLRLDVVRDAREYRKRVTKRVLALQDVVDALEPKSALYSEVVAEEN
ESEVTSEMADDGAEAAEMPVAAEHSGGIEVNAAAETVANMEVDGGKANSEAVPEAVKESENKQDDMHINDDQTEVSDEGK
WKMVADEAERTTEATRSTEALPQAPMTSEVTRMTWEAGAADSVLDTRKVMEMVEALCGQNTQHCAVIGALAERVGALDRA
VRLVENAERRRRRGKKLKKDGKGNNRCYTN
MLEAVKVDPSWSRVESSRSVSVPVRFVGSDPEPVRRAARMPPAAVLRKRAPSSEAAVIRLQAAARGFMARKSVRAVREVE
REAAEVGEKVAREAEALRGDARARIAVGEALMKMMLRLDVVRDAREYRKRVTKRVLALQDVVDALEPKSALYSEVVAEEN
ESEVTSEMADDGAEAAEMPVAAEHSGGIEVNAAAETVANMEVDGGKANSEAVPEAVKESENKQDDMHINDDQTEVSDEGK
WKMVADEAERTTEATRSTEALPQAPMTSEVTRMTWEAGAADSVLDTRKVMEMVEALCGQNTQHCAVIGALAERVGALDRA
VRLVENAERRRRRGKKLKKDGKGNNRCYTN
MLEAVKVDPSWSRVESSRSVSVPVRFVGSDPEPVRRAARMPPAAVLRKRAPSSEAAVIRLQAAARGFMARKSVRAVREVE
REAAEVGEKVAREAEALRGDARARIAVGEALMKMMLRLDVVRDAREYRKRVTKRVLALQDVVDALEPKSALYSEVVAEEN
ESEVTSEMADDGAEAAEMPVAAEHSGGIEVNAAAETVANMEVDGGKANSEAVPEAVKESENKQDDMHINDDQTEVSDEGK
WKMVADEAERTTEATRSTEALPQAPMTSEVTRMTWEAGAADSVLDTRKVMEMVEALCGQNTQHCAVIGALAERVGALDRA
VRLVENAERRRRRGKKLKKDGKGNNRCYTN
MLEAVKVDPSWSRVESSRSVSVPVRFVGSDPEPVRRAARMPPAAVLRKRAPSSEAAVIRLQAAARGFMARKSVRAVREVE
REAAEVGEKVAREAEALRGDARARIAVGEALMKMMLRLDVVRDAREYRKRVTKRVLALQDVVDALEPKSALYSEVVAEEN
ESEVTSEMADDGAEAAEMPVAAEHSGGIEVNAAAETVANMEVDGGKANSEAVPEAVKESENKQDDMHINDDQTEVSDEGK
WKMVADEAERTTEATRSTEALPQAPMTSEVTRMTWEAGAADSVLDTRKVMEMVEALCGQNTQHCAVIGALAERVGALDRA
VRLVENAERRRRRGKKLKKDGKGNNRCYTN
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00612 |
|
| PF02179 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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CTGATCCGTCCCGCGGCGTCGACGG...
CTGATCCGTCCCGCGGCGTCGACGGGTTCTTCCCTGCCGCCGCAGAAGCCATGCTGGAGGCGGTGAAGGTGGACCCCTCGTGGTCCAGGGTCGAGTCTTCGAGGTCGGTCTCAGTTCCTGTCCGCTTCGTCGGTTCCGACCCGGAGCCGGTGCGCAGGGCGGCCAGGATGCCACCGGCGGCGGTGCTGAGGAAGCGGGCGCCGTCGTCAGAGGCGGCGGTGATTAGGCTGCAGGCCGCGGCGCGCGGGTTCATGGCGAGGAAGTCGGTGCGTGCTGTTCGTGAGGTGGAGCGTGAGGCGGCGGAGGTCGGGGAGAAGGTTGCGCGTGAGGCAGAGGCGCTGCGCGGGGACGCGAGGGCGCGGATCGCCGTCGGGGAGGCGCTGATGAAGATGATGTTGCGACTCGATGTGGTGCGCGACGCGCGTGAATACCGGAAGAGGGTCACCAAGCGGGTCCTCGCGCTGCAGGATGTTGTTGATGCCCTCGAACCAAAGTCGGCGCTGTATTCGGAGGTCGTGGCGGAGGAGAACGAGTCTGAGGTGACGTCCGAGATGGCGGACGACGGCGCGGAGGCGGCGGAGATGCCGGTCGCCGCGGAGCACAGCGGCGGGATTGAGGTGAATGCAGCGGCTGAGACGGTTGCCAATATGGAGGTGGACGGGGGTAAAGCTAACAGCGAGGCGGTGCCAGAAGCGGTGAAGGAATCCGAAAATAAGCAGGACGACATGCACATTAATGACGACCAGACGGAAGTCTCCGATGAGGGCAAATGGAAGATGGTGGCGGATGAAGCGGAGCGTACAACTGAGGCGACGAGGTCCACGGAGGCGCTCCCGCAGGCACCGATGACGAGCGAGGTGACGAGGATGACATGGGAGGCCGGAGCTGCCGACAGCGTCCTGGACACTCGGAAGGTTATGGAGATGGTCGAGGCCCTGTGCGGGCAGAACACGCAGCATTGTGCGGTGATCGGGGCTCTGGCGGAGCGTGTGGGCGCGCTTGACCGTGCCGTGCGGCTGGTGGAGAACGCCGAGCGCCGTCGGCGGCGGGGCAAGAAGCTGAAGAAGGATGGGAAGGGGAACAACAGGTGCTACACCAATTGAGGACAACTCTACTTTCCTTGTCTGTAGCGACG
GRMZM2G382918_T01 from maize genome v3
Amino Acid Sequence
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MLEAVKVDPSWSRVESSRSVSVPVRFVGSDPEPVRRAARMPPAAVLRKRAPSSEAAVIRLQAAARGFMARKSVRAVREVE
REAAEVGEKVAREAEALRGDARARIAVGEALMKMMLRLDVVRDAREYRKRVTKRVLALQDVVDALEPKSALYSEVVAEEN
ESEVTSEMADDGAEAAEMPVAAEHSGGIEVNAAAETVANMEVDGGKANSEAVPEAVKESENKQDDMHINDDQTEVSDEGK
WKMVADEAERTTEATRSTEALPQAPMTSEVTRMTWEAGAADSVLDTRKVMEMVEALCGQNTQHCAVIGALAERVGALDRA
VRLVENAERRRRRGKKLKKDGKGNNRCYTN
Nucleotide Sequence
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CCGCCGGCAGCTAATTCGACGTCCC...
CCGCCGGCAGCTAATTCGACGTCCCCGTACCACTACGCCTATCCCTACTACCGGTACCAGCACCCTGATCCGTCCCGCGGCGTCGACGGGTTCTTCCCTGCCGCCGCAGAAGCCATGCTGGAGGCGGTGAAGGTGGACCCCTCGTGGTCCAGGGTCGAGTCTTCGAGGTCGGTCTCAGTTCCTGTCCGCTTCGTCGGTTCCGACCCGGAGCCGGTGCGCAGGGCGGCCAGGATGCCACCGGCGGCGGTGCTGAGGAAGCGGGCGCCGTCGTCAGAGGCGGCGGTGATTAGGCTGCAGGCCGCGGCGCGCGGGTTCATGGCGAGGAAGTCGGTGCGTGCTGTTCGTGAGGTGGAGCGTGAGGCGGCGGAGGTCGGGGAGAAGGTTGCGCGTGAGGCAGAGGCGCTGCGCGGGGACGCGAGGGCGCGGATCGCCGTCGGGGAGGCGCTGATGAAGATGATGTTGCGACTCGATGTGGTGCGCGACGCGCGTGAATACCGGAAGAGGGTCACCAAGCGGGTCCTCGCGCTGCAGGATGTTGTTGATGCCCTCGAACCAAAGTCGGCGCTGTATTCGGAGGTCGTGGCGGAGGAGAACGAGTCTGAGGTGACGTCCGAGATGGCGGACGACGGCGCGGAGGCGGCGGAGATGCCGGTCGCCGCGGAGCACAGCGGCGGGATTGAGGTGAATGCAGCGGCTGAGACGGTTGCCAATATGGAGGTGGACGGGGGTAAAGCTAACAGCGAGGCGGTGCCAGAAGCGGTGAAGGAATCCGAAAATAAGCAGGACGACATGCACATTAATGACGACCAGACGGAAGTCTCCGATGAGGGCAAATGGAAGATGGTGGCGGATGAAGCGGAGCGTACAACTGAGGCGACGAGGTCCACGGAGGCGCTCCCGCAGGCACCGATGACGAGCGAGGTGACGAGGATGACATGGGAGGCCGGAGCTGCCGACAGCGTCCTGGACACTCGGAAGGTTATGGAGATGGTCGAGGCCCTGTGCGGGCAGAACACGCAGCATTGTGCGGTGATCGGGGCTCTGGCGGAGCGTGTGGGCGCGCTTGACCGTGCCGTGCGGCTGGTGGAGAACGCCGAGCGCCGTCGGCGGCGGGGCAAGAAGCTGAAGAAGGATGGGAAGGGGAACAACAGGTGCTACACCAATTGA
Zm00001d009385_T001 from maize genome v4
Amino Acid Sequence
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MKWEDAMELTCTAATSSSGEARASNTKPPAANSTSPYHYAYPYYRYQHPDPSRGVDGFFPAAAEAMLEAVKVDPSWSRVE
SSRSVSVPVRFVGSDPEPVRRAARMPPAAVLRKRAPSSEAAVIRLQAAARGFMARKSVRAVREVEREAAEVGEKVAREAE
ALRGDARARIAVGEALMKMMLRLDVVRDAREYRKRVTKRVLALQDVVDALEPKSALYSEVVAEENESEVTSEMADDGAEA
AEMPVAAEHSGGIEVNAAAETVANMEVDGGKANSEAVPEAVKESENKQDDMHINDDQTEVSDEGKWKMVADEAERTTEAT
RSTEALPQAPMTSEVTRMTWEAGAADSVLDTRKVMEMVEALCGQNTQHCAVIGALAERVGALDRAVRLVENAERRRRRGK
KLKKDGKGNNRCYTN
Nucleotide Sequence
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ATGAAGTGGGAGGACGCCATGGAGC...
ATGAAGTGGGAGGACGCCATGGAGCTTACCTGCACGGCGGCGACGAGCAGCTCCGGGGAGGCGAGGGCGAGCAACACGAAACCGCCGGCAGCTAATTCGACGTCCCCGTACCACTACGCCTATCCCTACTACCGGTACCAGCACCCTGATCCGTCCCGCGGCGTCGACGGGTTCTTCCCTGCCGCCGCAGAAGCCATGCTGGAGGCGGTGAAGGTGGACCCCTCGTGGTCCAGGGTCGAGTCTTCGAGGTCGGTCTCAGTTCCTGTCCGCTTCGTCGGTTCCGACCCGGAGCCGGTGCGCAGGGCGGCCAGGATGCCACCGGCGGCGGTGCTGAGGAAGCGGGCGCCGTCGTCAGAGGCGGCGGTGATTAGGCTGCAGGCCGCGGCGCGCGGGTTCATGGCGAGGAAGTCGGTGCGTGCTGTTCGTGAGGTGGAGCGTGAGGCGGCGGAGGTCGGGGAGAAGGTTGCGCGTGAGGCAGAGGCGCTGCGCGGGGACGCGAGGGCGCGGATCGCCGTCGGGGAGGCGCTGATGAAGATGATGTTGCGACTCGATGTGGTGCGCGACGCGCGTGAATACCGGAAGAGGGTCACCAAGCGGGTCCTCGCGCTGCAGGATGTTGTTGATGCCCTCGAACCAAAGTCGGCGCTGTATTCGGAGGTCGTGGCGGAGGAGAACGAGTCTGAGGTGACGTCCGAGATGGCGGACGACGGCGCGGAGGCGGCGGAGATGCCGGTCGCCGCGGAGCACAGCGGCGGGATTGAGGTGAATGCAGCGGCTGAGACGGTTGCCAATATGGAGGTGGACGGGGGTAAAGCTAACAGCGAGGCGGTGCCAGAAGCGGTGAAGGAATCCGAAAATAAGCAGGACGACATGCACATTAATGACGACCAGACGGAAGTCTCCGATGAGGGCAAATGGAAGATGGTGGCGGATGAAGCGGAGCGTACAACTGAGGCGACGAGGTCCACGGAGGCGCTCCCGCAGGCACCGATGACGAGCGAGGTGACGAGGATGACATGGGAGGCCGGAGCTGCCGACAGCGTCCTGGACACTCGGAAGGTTATGGAGATGGTCGAGGCCCTGTGCGGGCAGAACACGCAGCATTGTGCGGTGATCGGGGCTCTGGCGGAGCGTGTGGGCGCGCTTGACCGTGCCGTGCGGCTGGTGGAGAACGCCGAGCGCCGTCGGCGGCGGGGCAAGAAGCTGAAGAAGGATGGGAAGGGGAACAACAGGTGCTACACCAATTGA
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